Thursday, 12 December 2013

Definitions in Microscopy - For MDS - Oral Pathology students


Aberrations of a lens: Faults in lens design that cause optical performance to deviate from that of an ideal lens. Usually attributed to materials composing the lens and the spherical curvatures of lens surfaces. Lens aberrations include chromatic and spherical aberration, astigmatism, coma, distortion, and field curvature.

Absorbance or optical density:  The amount of absorption of light by a substance as measured in a spectrophotometer and given as the log of the reciprocal of the transmittance, where transmittance is the ratio of the transmitted light intensity to incident light intensity.

Achromat: A lens corrected for chromatic aberration at two wavelengths (red and blue) and for spherical aberration (green).

Airy disk: The central diffraction spot in the focused image of a point source of light. Diffraction at the front aperture of the lens disturbs the incident wavefront, causing the diffraction pattern. The Airy disk diameter is determined by the wavelength of light and the angular diameter of the lens as seen from the image plane.

Amplitude object. Objects that absorb light as opposed to those that shift the phase of light (phase objects) as the basis for image formation.

Amplitude of an electromagnetic wave. The magnitude of the electric field vector of an electromagnetic wave. Amplitude is distinguished from intensity (irradiance), a measure of the amount of light energy or photon flux, which in visual perception is proportional to amplitude squared.

Anisotropic. In describing the optical properties of an object or propagation medium, having dissimilar properties in different directions.

Annulus. In phase contrast microscopy, the transparent ring at the front aperture of the condenser that provides illumination of the specimen.

Aperture angle. The angle subtended by the edges of a lens as seen from a point in the specimen plane or in the image plane. Aperture angle is included in the expression for numerical aperture (NA/  n sin), where n is the refractive index and  is onehalf of the full aperture angle. See also Numerical aperture (NA).


Aperture plane. In a microscope adjusted for Koehler illumination, the set of conjugate focal planes located at the light source, the front aperture of the condenser, the back aperture of the objective lens, and the iris of the eye. Adjustable aperture diaphragms at these locations are used to limit stray light and determine the numerical aperture, and hence the spatial resolution, of the instrument.

Apochromat A lens especially designed to correct for chromatic aberration at three or four wavelengths (red, green, blue, UV) and at two or more wavelengths (green, red) for spherical aberration. The high degree of color correction makes these lenses suitable for fluorescence microscopy and stained histological specimens in bright-field microscopy.


Astigmatism. An off-axis aberration of lenses whereby rays from an off-axis object passing through the horizontal and vertical diameters of a lens are focused as a short streak at two different focal planes. The streaks appear as ellipses drawn out in horizontal and vertical directions at either side of best focus, where the point image is a small disk. Off-axis astigmatism increases with increasing displacement of the object from the optic axis. Astigmatism is also caused by asymmetric lens curvature due to mistakes in manufacture or improper mounting of a lens in its barrel. 

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